Research & Publications

Pioneering research in genomics, bioinformatics, and computational biology from our team of scientists and collaborators.

GPU-Accelerated Deep Learning for Accurate Variant Calling in Whole-Genome Sequencing Data

This whitepaper details a novel deep learning architecture that leverages NVIDIA Parabricks for ultra-fast and highly accurate germline and somatic variant calling, significantly reducing analysis time from days to hours.

1,500+
Citations
50 pages
In-depth Analysis
Q2 2024
Published

Research Areas

Our core areas of focus in computational biology and bioinformatics

Genomics & Sequencing

WGS, WES, RNA-Seq, and single-cell sequencing analysis pipelines.

35 Papers 2024 Active
Drug Discovery

Target identification, molecular docking, and in silico drug repurposing.

28 Papers 2024 Active
AI/ML in Bioinformatics

Deep learning for disease prediction, variant classification, and biomarker discovery.

42 Papers 2024 Active
Spatial Transcriptomics

Analysis of gene expression in the context of tissue architecture.

15 Papers In Progress
Proteomics & Metabolomics

Mass spectrometry data analysis and multi-omics integration.

25 Papers 2024 Active
Cancer Genomics

Tumor profiling, liquid biopsy analysis, and neoantigen prediction.

30 Papers In Progress

Recent Publications

Our latest contributions to the field of bioinformatics

Genomics Dec 2024
A Deep Learning Framework for Predicting Drug-Target Interactions

This paper introduces a novel graph neural network model for predicting interactions between drugs and protein targets, accelerating the initial stages of drug discovery.

Dr. Emily Carter, Dr. Ben Miller
Nature Biotechnology
AI/ML Nov 2024
Scalable Analysis of Spatial Transcriptomics Data Using GPU-Acceleration

We present a new computational method that leverages GPUs to analyze high-resolution spatial transcriptomics data, enabling the study of cellular heterogeneity in complex tissues.

Dr. David Chen, Dr. Olivia Garcia
Cell

Research Partnerships

Collaborating with leading academic and research institutions worldwide